Running Coupled Ocean: Difference between revisions

Line 73:

Need to ensure the following:

In AGCM.rc:

=====AGCM.rc=====

OGCM_NX = NX = 8

OGCM_NY = NY = 10

CICE_NPROCS = 80

In input.nml:

=====input.nml=====

layout = 8,10,

In gcm_run.j:

=====gcm_run.j=====

#PBS -l select=7:ncpus=12:mpiprocs=12

(need 80 cpus, hence 7 nodes)

In HISTORY.rc~~: comment~~ out the line

=====HISTORY.rc=====

Comment out the line

'RUNOFF' , 'SURFACE' ,

in geosgcm_surf.fields (model crashes with this option).

~~Next, we edit CAP.rc and gcm_run.j (to run a 1-day simulation).~~

===Copy restarts===

Example restarts can be found in ~yvikhlia/geos5/test180/expdir. Several new restarts are needed but these can be bootstrapped (according to Yury). The new ones are orad_import, seaice_import, and seaice_internal.

Copy restarts ~~(example~~ restarts can be found in ~yvikhlia/geos5/test180/expdir). Several new restarts are needed but these can be bootstrapped according to ~~Yuri~~. The new ones are orad_import, seaice_import, and seaice_internal.

$ cp ~yvikhlia/geos5/test180/expdir/*_rst .

$ cp ~yvikhlia/geos5/test180/expdir/cap_restart .

We may need to ~~edit cap_restart~~ to specify a particular year (no changes in month, day or time).

'cap_restart' may need to edited as well to specify a particular year (no changes in month, day or time).

When the experiment directory is created (by gcm_setup) a new directory is now there called RESTART. Inside are restart files, the only one of which is required is ocean_temp_salt.res.nc. The rest can be bootstrapped.

@@ Line 73: / Line 73: @@
 Need to ensure the following:
-In AGCM.rc:
+=====AGCM.rc=====
   OGCM_NX = NX = 8
   OGCM_NY = NY = 10
   CICE_NPROCS = 80
-In input.nml:
+=====input.nml=====
   layout = 8,10,
-In gcm_run.j:
+=====gcm_run.j=====
   #PBS -l select=7:ncpus=12:mpiprocs=12
 (need 80 cpus, hence 7 nodes)
-In HISTORY.rc: comment out the line
+=====HISTORY.rc=====
+Comment out the line
   'RUNOFF'    , 'SURFACE'       ,
 in geosgcm_surf.fields (model crashes with this option).
-Next, we edit CAP.rc and gcm_run.j (to run a 1-day simulation).
+===Copy restarts===
+Example restarts can be found in ~yvikhlia/geos5/test180/expdir. Several new restarts are needed but these can be bootstrapped (according to Yury). The new ones are orad_import, seaice_import, and seaice_internal.
-Copy restarts (example restarts can be found in ~yvikhlia/geos5/test180/expdir). Several new restarts are needed but these can be bootstrapped according to Yuri. The new ones are orad_import, seaice_import, and seaice_internal.
   $ cp ~yvikhlia/geos5/test180/expdir/*_rst .
   $ cp ~yvikhlia/geos5/test180/expdir/cap_restart .
-We may need to edit cap_restart to specify a particular year (no changes in month, day or time).
+'cap_restart' may need to edited as well to specify a particular year (no changes in month, day or time).
 When the experiment directory is created (by gcm_setup) a new directory is now there called RESTART. Inside are restart files, the only one of which is required is ocean_temp_salt.res.nc. The rest can be bootstrapped.