Setting up S2Sv3 model: Difference between revisions

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cvs co -P -r tag_name GEOSodas_m7

where <code>tag_name</code> is the name of the CVS tag of interest. ~~It can be for instance~~ <code>yuri-s2s3-unstable-~~SLES12~~</code>.

where <code>tag_name</code> is the name of the CVS tag of interest. Current S2Sv3 tag is <code>yuri-s2s3-unstable-FullModel</code>.

You will get a directory named <code>GEOSodas</code>.

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In the last command, you might be asked to provide a <code>sponsor code id</code> is if you have more than one on the platform you are using.

An alternative method to compile the code is use a simple script (C-shell here) for a serial build. It assumes that that the script is located at the same level as the <code>GEOSodas/</code> directory.

~~#!/bin/csh -f~~

~~source /usr/share/modules/init/csh~~

~~set curDIR = `pwd`~~

~~setenv ESMADIR ${curDIR}/GEOSodas~~

~~cd $ESMADIR/src~~

~~module purge~~

~~source g5_modules~~

~~set CLEAN = 0~~

~~set MAKEALL = 1~~

~~set MAKEALLDEBUG = 0~~

~~if ($CLEAN) gmake realclean~~

~~if ($MAKEALLDEBUG) gmake install BOPT=g~~

~~if ($MAKEALL) gmake pinstall~~

~~Regardless the method that you use to build the code, a~~ directory named <code>Linux/</code> will be created inside <code>GEOSodas/</code>. The <code>Linux/</code> directory contains temporary files, libraries and executables created during the compilation process. To make sure that the code was successfully compiled, check that the file <code>GEOSgcm.x</code> exists in the directory <code>GEOSodas/src/Applications/GEOSgcm_App/</code>.

A directory named <code>Linux/</code> will be created inside <code>GEOSodas/</code>. The <code>Linux/</code> directory contains temporary files, libraries and executables created during the compilation process. To make sure that the code was successfully compiled, check that the file <code>GEOSgcm.x</code> exists in the directory <code>GEOSodas/src/Applications/GEOSgcm_App/</code>.

'''Note:''' To compile the model on Rome nodes at NAS, use <code>g5_modules_4ROME</code> modules file:

cp g5_modules_4ROME g5_modules

./parallel_buid.csh

'''Note:''' To compile the model on Milan nodes at NCCS, use <code>yuri-s2s3-unstable-milan</code> tag and run the <code>parallel_build.csh</code> from Milan nodes:

ssh discover-mil

...

./parallel_build.csh

or request an interactive SLURM session with <code>--constraint=mil</code> option and follow steps described above.

=== Create the Experiment Directory ===

@@ Line 10: / Line 10: @@
      cvs co -P -r tag_name GEOSodas_m7
-where <code>tag_name</code> is the name of the CVS tag of interest. It can be for instance <code>yuri-s2s3-unstable-SLES12</code>.
+where <code>tag_name</code> is the name of the CVS tag of interest. Current S2Sv3 tag is <code>yuri-s2s3-unstable-FullModel</code>.
 You will get a directory named <code>GEOSodas</code>.
@@ Line 24: / Line 24: @@
 In the last command, you might be asked to provide a <code>sponsor code id</code> is if you have more than one on the platform you are using.
-An alternative method to compile the code is use a simple script (C-shell here) for a serial build. It assumes that that the script is located at the same level as the <code>GEOSodas/</code> directory.
-     #!/bin/csh -f
-     source /usr/share/modules/init/csh
-     set curDIR = `pwd`
-     setenv ESMADIR ${curDIR}/GEOSodas
-     cd $ESMADIR/src
-     module purge
-     source g5_modules
-     set CLEAN = 0
-     set MAKEALL = 1
-     set MAKEALLDEBUG = 0
-     if ($CLEAN) gmake realclean
-     if ($MAKEALLDEBUG) gmake install BOPT=g
-     if ($MAKEALL) gmake pinstall
-Regardless the method that you use to build the code, a directory named <code>Linux/</code> will be created inside <code>GEOSodas/</code>. The <code>Linux/</code> directory contains temporary files, libraries and executables created during the compilation process. To make sure that the code was successfully compiled, check that the file <code>GEOSgcm.x</code> exists in the directory <code>GEOSodas/src/Applications/GEOSgcm_App/</code>.
+A directory named <code>Linux/</code> will be created inside <code>GEOSodas/</code>. The <code>Linux/</code> directory contains temporary files, libraries and executables created during the compilation process. To make sure that the code was successfully compiled, check that the file <code>GEOSgcm.x</code> exists in the directory <code>GEOSodas/src/Applications/GEOSgcm_App/</code>.
+'''Note:''' To compile the model on Rome nodes at NAS, use <code>g5_modules_4ROME</code> modules file:
+    cp g5_modules_4ROME g5_modules
+    ./parallel_buid.csh
+'''Note:''' To compile the model on Milan nodes at NCCS, use <code>yuri-s2s3-unstable-milan</code> tag and run the <code>parallel_build.csh</code> from Milan nodes:
+    ssh discover-mil
+    ...
+    ./parallel_build.csh
+or request an interactive SLURM session with <code>--constraint=mil</code> option and follow steps described above.
 === Create the Experiment Directory ===