Heracles Single Column Model: Difference between revisions
→Setting Up and Running Existing SCM Experiments: Make "how to run" a bit more useful. |
→Setting Up and Running Existing SCM Experiments: Need to source g5_modules. |
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Once the allocation is granted, it starts an interactive shell on the job node, from which you can run the GEOS-5 executable. Since all of the necessary configuration files are copied to the experiment directory by <code>scm_setup</code>, running the SCM requires none of the extra environmental infrastructure needed for a global experiment that the run script <code>gcm_run.j</code> creates. | Once the allocation is granted, it starts an interactive shell on the job node, from which you can run the GEOS-5 executable. Since all of the necessary configuration files are copied to the experiment directory by <code>scm_setup</code>, running the SCM requires none of the extra environmental infrastructure needed for a global experiment that the run script <code>gcm_run.j</code> creates. | ||
To run the SCM, then | To run the SCM, first, you'll need to source g5_modules and then you can run it: | ||
<nowiki>$ mpirun -np 1 ./GEOSgcm.x |& tee run.log | <nowiki>$ setenv ESMADIR /discover/path/to/your/Heracles-5_2/GEOSagcm | ||
$ source $ESMADIR/src/g5_modules | |||
$ mpirun -np 1 ./GEOSgcm.x |& tee run.log | |||
srun.slurm: cluster configuration lacks support for cpu binding | srun.slurm: cluster configuration lacks support for cpu binding | ||